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Intron Name: Anas_platyrhynchos_platyrhynchos_8_10515530_10525478_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10515530 - 10525478

Intron Length:

9949

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

GTTTCCCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAC

U12 Branch Point Sequence:

TCCATTGTAACT

Flanking Amino Acid:

DSFDVLLSHKYGLAAFRAFL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

76.1

34.8

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

83.9

0.76

0.8

77.6

31.1

Minor 5ss

32.1

-2

2.7

37.9

Minor BPS

48.8

-0

67.12

44.4

Associated Gene:

Gene:

RGS8

Ensembl Gene ID:

ENSAPLG00000030593

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041502

10509819 - 10528499

18681

ENSAPLT00000018656

10512496 - 10528499

16004