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Intron Name: Anas_platyrhynchos_platyrhynchos_8_10540156_10541313_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10540156 - 10541313

Intron Length:

1158

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTAGG

5'SS Class:

strong_major

3'SS Sequence:

CTCCTCTGTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

TCCCCCCTCACC

Flanking Amino Acid:

ESFDQLLKSKNGVTAFHTFL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

0.9

71.6

40.2

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

76.7

0.6

0.9

32.5

Minor 5ss

31.4

-2.1

2.7

33.7

35.3

Minor BPS

47.9

-0.1

2.1

60.5

44.7

Associated Gene:

Gene:

RGS16

Ensembl Gene ID:

ENSAPLG00000009623

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038684

10535099 - 10541789

6691

ENSAPLT00000010016

10538872 - 10541789

2918

ENSAPLT00000040388

10537642 - 10541789

4148