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Intron Name: Anas_platyrhynchos_platyrhynchos_8_10560431_10561408_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

10560431 - 10561408

Intron Length:

978

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TTG|GCAGCTTGC

5'SS Class:

major

3'SS Sequence:

GCACTTTGTGAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTCACAT

U12 Branch Point Sequence:

CACTTTGTGAAG

Flanking Amino Acid:

VEKPTKRPRLVLHNPAHLQY

Intron Amino Acid Position:

644

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.2

0.36

1.3

43.5

Major BPS

59.9

0.25

1.2

38.9

Major PPT

58.7

0.2

1.2

59.3

40.7

Minor 5ss

34.5

-1.8

4.1

49.2

42.4

Minor BPS

-0.9

38.68

39.1

Associated Gene:

Gene:

RGSL1

Ensembl Gene ID:

ENSAPLG00000010067

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010492

10557564 - 10569585

12022