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Intron Name: Anas_platyrhynchos_platyrhynchos_8_10627871_10629825_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

10627871 - 10629825

Intron Length:

1955

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TGA|GCGAGGAGC

5'SS Class:

weak_major

3'SS Sequence:

GCTACCCTGGAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATAGCAA

U12 Branch Point Sequence:

CTACCCTGGAAG

Flanking Amino Acid:

HALQPVRTHLTAMHSLHPHP

Intron Amino Acid Position:

362

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.4

0.2

1.3

63.9

37.5

Major BPS

48.1

-0.1

1.3

57.8

Major PPT

52.3

0.05

1.1

52.6

36.9

Minor 5ss

18.1

-3.7

3.6

21.4

30.1

Minor BPS

47.2

-0.3

1.7

51.03

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015183

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015820

10627758 - 10631113

3356