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Intron Name: Anas_platyrhynchos_platyrhynchos_8_10664171_10664633_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10664171 - 10664633

Intron Length:

463

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGGA

5'SS Class:

strong_major

3'SS Sequence:

CGGTGCCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTGCAT

U12 Branch Point Sequence:

AGCCCCTGCATT

Flanking Amino Acid:

EGRSQTPNRQGTGSLSESSI

Intron Amino Acid Position:

2075

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

68.5

38.7

Major BPS

50.1

1.4

43.2

Major PPT

69.9

0.45

61.7

Minor 5ss

25.2

-2.8

3.2

31.3

42.9

Minor BPS

46.6

-0.1

1.9

61.57

42.2

Associated Gene:

Gene:

CACNA1E

Ensembl Gene ID:

ENSAPLG00000011451

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042365

10663634 - 10729946

66313

ENSAPLT00000012181

10663634 - 10729946

66313