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Intron Name: Anas_platyrhynchos_platyrhynchos_8_10664828_10664944_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10664828 - 10664944

Intron Length:

117

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGCGGG

5'SS Class:

major

3'SS Sequence:

GGGTTTGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTGAC

U12 Branch Point Sequence:

AGAGCGGGGACT

Flanking Amino Acid:

LSARRLNADSGHRSDGHRSG

Intron Amino Acid Position:

2010

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

45.2

Major BPS

55.9

0.15

1.2

Major PPT

69.1

0.43

61.9

44.4

Minor 5ss

29.9

-2.3

3.2

29.1

43.5

Minor BPS

35.5

-1

2.5

51.32

42.9

Associated Gene:

Gene:

CACNA1E

Ensembl Gene ID:

ENSAPLG00000011451

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042365

10663634 - 10729946

66313

ENSAPLT00000012181

10663634 - 10729946

66313