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Intron Name: Anas_platyrhynchos_platyrhynchos_8_10666627_10667543_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10666627 - 10667543

Intron Length:

917

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAAGTCA

5'SS Class:

major

3'SS Sequence:

TGTTTGTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCCCAA

U12 Branch Point Sequence:

CATCCCAAGAGC

Flanking Amino Acid:

HGQFQEHQSLEPEVREFQRV

Intron Amino Acid Position:

1907

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.7

0.54

64.4

35.9

Major BPS

54.3

0.11

1.2

64.5

33.7

Major PPT

85.2

0.79

0.9

76.9

42.1

Minor 5ss

36.5

-1.5

3.3

44.6

45.3

Minor BPS

40.6

-0.7

2.1

48.95

41.2

Associated Gene:

Gene:

CACNA1E

Ensembl Gene ID:

ENSAPLG00000011451

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042365

10663634 - 10729946

66313

ENSAPLT00000012181

10663634 - 10729946

66313