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Intron Name: Anas_platyrhynchos_platyrhynchos_8_10667653_10668139_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10667653 - 10668139

Intron Length:

487

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAGTATC

5'SS Class:

major

3'SS Sequence:

ACCATCCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

TCTCCCTGAAGC

Flanking Amino Acid:

PYLQQDTLSGLSSRSGFPSL

Intron Amino Acid Position:

1870

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.1

74.7

35.4

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

73.2

0.52

0.9

65.6

35.3

Minor 5ss

37.8

-1.4

55.7

41.6

Minor BPS

57.9

0.23

1.8

68.78

42.5

Associated Gene:

Gene:

CACNA1E

Ensembl Gene ID:

ENSAPLG00000011451

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042365

10663634 - 10729946

66313

ENSAPLT00000012181

10663634 - 10729946

66313