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Intron Name: Anas_platyrhynchos_platyrhynchos_8_10668247_10668653_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10668247 - 10668653

Intron Length:

407

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGCTC

5'SS Class:

strong_major

3'SS Sequence:

TTCCCCATCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAT

U12 Branch Point Sequence:

TTCCCCATCACA

Flanking Amino Acid:

KKQRQQLEEQKNAPMFQRME

Intron Amino Acid Position:

1835

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

59.7

0.24

1.3

68.6

38.9

Major PPT

75.1

0.56

0.8

68.8

30.1

Minor 5ss

29.9

-2.3

3.4

45.6

Minor BPS

52.1

0.06

2.1

69.79

42.2

Associated Gene:

Gene:

CACNA1E

Ensembl Gene ID:

ENSAPLG00000011451

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042365

10663634 - 10729946

66313

ENSAPLT00000012181

10663634 - 10729946

66313