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Intron Name: Anas_platyrhynchos_platyrhynchos_8_10668755_10669262_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10668755 - 10669262

Intron Length:

508

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTCTC

5'SS Class:

strong_major

3'SS Sequence:

GCTGTGCTCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATAAAA

U12 Branch Point Sequence:

ATAAAAGCATCC

Flanking Amino Acid:

MLDLLVPMPKTSDLTVGKIY

Intron Amino Acid Position:

1801

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

0.9

35.1

Major BPS

0.08

60.9

31.3

Major PPT

69.6

0.44

65.1

41.2

Minor 5ss

-1.7

3.1

44.9

36.9

Minor BPS

31.4

-1.4

2.2

41.43

37.7

Associated Gene:

Gene:

CACNA1E

Ensembl Gene ID:

ENSAPLG00000011451

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042365

10663634 - 10729946

66313

ENSAPLT00000012181

10663634 - 10729946

66313