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Intron Name: Anas_platyrhynchos_platyrhynchos_8_10670498_10672093_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10670498 - 10672093

Intron Length:

1596

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGATCAA

5'SS Class:

major

3'SS Sequence:

CTCTCTTGCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

GTTTTCTTCTCT

Flanking Amino Acid:

KRCPSKVAYKRLVLMNMPVA

Intron Amino Acid Position:

1730

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.8

0.61

1.1

67.5

39.6

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

75.4

0.57

0.9

71.7

32.7

Minor 5ss

31.5

-2.1

3.2

40.2

45.9

Minor BPS

45.3

-0.2

3.6

80.05

Associated Gene:

Gene:

CACNA1E

Ensembl Gene ID:

ENSAPLG00000011451

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042365

10663634 - 10729946

66313

ENSAPLT00000012181

10663634 - 10729946

66313