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Intron Name: Anas_platyrhynchos_platyrhynchos_8_10678067_10678211_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10678067 - 10678211

Intron Length:

145

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTTCC

5'SS Class:

strong_major

3'SS Sequence:

CCCCCTCACCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCCTAT

U12 Branch Point Sequence:

TCCCCCTCACCT

Flanking Amino Acid:

VSFIFFCSFLMLNLFVAVIM

Intron Amino Acid Position:

1655

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

73.7

31.1

Major BPS

56.4

0.16

1.3

56.1

41.3

Major PPT

61.4

0.26

0.8

53.7

29.9

Minor 5ss

36.2

-1.6

2.8

41.9

38.9

Minor BPS

51.1

0.11

1.9

69.41

47.1

Associated Gene:

Gene:

CACNA1E

Ensembl Gene ID:

ENSAPLG00000011451

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042365

10663634 - 10729946

66313

ENSAPLT00000012181

10663634 - 10729946

66313