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Intron Name: Anas_platyrhynchos_platyrhynchos_8_10678378_10678474_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

10678378 - 10678474

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGAAC

5'SS Class:

strong_major

3'SS Sequence:

GCCTTGGGCGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

GGGTGCTGAGCG

Flanking Amino Acid:

SFLGSLMLLFRSATGEAWQE

Intron Amino Acid Position:

1599

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.73

38.2

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

58.8

0.2

1.1

52.4

41.6

Minor 5ss

31.2

-2.2

3.4

41.6

45.4

Minor BPS

42.9

-0.6

2.1

46.01

45.9

Associated Gene:

Gene:

CACNA1E

Ensembl Gene ID:

ENSAPLG00000011451

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042365

10663634 - 10729946

66313

ENSAPLT00000012181

10663634 - 10729946

66313