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Intron Name: Anas_platyrhynchos_platyrhynchos_8_10678567_10680120_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10678567 - 10680120

Intron Length:

1554

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGCACG

5'SS Class:

major

3'SS Sequence:

CTCCCTCTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCGAAC

U12 Branch Point Sequence:

GTTGCCCGAACC

Flanking Amino Acid:

FFIYAIIGMQVFGNIKLDEE

Intron Amino Acid Position:

1569

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

62.3

43.9

Major BPS

-0.3

1.3

46.9

34.4

Major PPT

0.5

0.9

68.4

31.9

Minor 5ss

32.9

-2

3.1

39.9

45.9

Minor BPS

52.9

0.07

1.9

69.2

41.6

Associated Gene:

Gene:

CACNA1E

Ensembl Gene ID:

ENSAPLG00000011451

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042365

10663634 - 10729946

66313

ENSAPLT00000012181

10663634 - 10729946

66313