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Intron Name: Anas_platyrhynchos_platyrhynchos_8_10680187_10680356_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10680187 - 10680356

Intron Length:

170

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATTCC

5'SS Class:

strong_major

3'SS Sequence:

GCTTCCCTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTCAT

U12 Branch Point Sequence:

GATGACTCATGT

Flanking Amino Acid:

LLWTFVQSFKALPYVCLLIA

Intron Amino Acid Position:

1547

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

78.2

30.3

Major BPS

69.4

0.48

1.2

71.6

36.4

Major PPT

75.6

0.58

0.8

69.2

31.3

Minor 5ss

40.8

-1

2.8

53.7

43.5

Minor BPS

39.8

-0.6

2.1

55.27

Associated Gene:

Gene:

CACNA1E

Ensembl Gene ID:

ENSAPLG00000011451

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042365

10663634 - 10729946

66313

ENSAPLT00000012181

10663634 - 10729946

66313