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Intron Name: Anas_platyrhynchos_platyrhynchos_8_10682720_10683144_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10682720 - 10683144

Intron Length:

425

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTGAGTATT

5'SS Class:

major

3'SS Sequence:

TGTCTGCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAC

U12 Branch Point Sequence:

TCTTCTTCACCT

Flanking Amino Acid:

FTVSTGEGWPQVLQHSVDVT

Intron Amino Acid Position:

1317

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

32.8

Major BPS

77.5

0.68

79.6

Major PPT

72.2

0.5

0.9

65.1

36.4

Minor 5ss

38.4

-1.3

41.2

Minor BPS

60.2

0.4

1.9

79.65

42.8

Associated Gene:

Gene:

CACNA1E

Ensembl Gene ID:

ENSAPLG00000011451

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042365

10663634 - 10729946

66313

ENSAPLT00000012181

10663634 - 10729946

66313