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Intron Name: Anas_platyrhynchos_platyrhynchos_8_10683283_10683645_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10683283 - 10683645

Intron Length:

363

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAGGTGCC

5'SS Class:

major

3'SS Sequence:

CCCAACCCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTAAA

U12 Branch Point Sequence:

TCTCCCCCAACC

Flanking Amino Acid:

DSSKDTEKDCIGNYVDHEKN

Intron Amino Acid Position:

1271

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

1.1

70.5

Major BPS

66.4

0.41

1.1

67.7

36.5

Major PPT

66.4

0.37

0.9

57.8

32.7

Minor 5ss

-1.7

3.5

48.5

40.9

Minor BPS

53.9

0.1

1.9

69.49

41.6

Associated Gene:

Gene:

CACNA1E

Ensembl Gene ID:

ENSAPLG00000011451

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042365

10663634 - 10729946

66313

ENSAPLT00000012181

10663634 - 10729946

66313