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Intron Name: Anas_platyrhynchos_platyrhynchos_8_10683807_10684570_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10683807 - 10684570

Intron Length:

764

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACGCTG

5'SS Class:

major

3'SS Sequence:

CCCTCCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCGCAG

U12 Branch Point Sequence:

CTGCCCGCAGCG

Flanking Amino Acid:

KTIKRLPKLKAVFDCVVTSL

Intron Amino Acid Position:

1218

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.2

64.3

47.1

Major BPS

38.6

-0.7

1.6

42.6

40.4

Major PPT

75.8

0.58

0.7

24.8

Minor 5ss

39.9

-1.1

3.4

55.8

48.4

Minor BPS

39.5

-0.9

2.3

44.86

Associated Gene:

Gene:

CACNA1E

Ensembl Gene ID:

ENSAPLG00000011451

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042365

10663634 - 10729946

66313

ENSAPLT00000012181

10663634 - 10729946

66313