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Intron Name: Anas_platyrhynchos_platyrhynchos_8_10684668_10687056_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10684668 - 10687056

Intron Length:

2389

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGC|GTAAGTGGC

5'SS Class:

major

3'SS Sequence:

TCCCATGTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCCCAT

U12 Branch Point Sequence:

TCCCTCCCATGT

Flanking Amino Acid:

VVGALVAFALATNKGRDIKT

Intron Amino Acid Position:

1185

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.9

0.42

1.4

Major BPS

59.9

0.25

1.3

70.1

Major PPT

64.7

0.33

1.1

60.4

Minor 5ss

-1.8

3.2

39.8

Minor BPS

36.2

-0.9

49.41

44.1

Associated Gene:

Gene:

CACNA1E

Ensembl Gene ID:

ENSAPLG00000011451

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042365

10663634 - 10729946

66313

ENSAPLT00000012181

10663634 - 10729946

66313