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Intron Name: Anas_platyrhynchos_platyrhynchos_8_10687164_10687289_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10687164 - 10687289

Intron Length:

126

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATAA

5'SS Class:

strong_major

3'SS Sequence:

CTTCCTCTCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTGAT

U12 Branch Point Sequence:

AGTTGGTGATCT

Flanking Amino Acid:

GVFTFEMVIKMIDQGLILQD

Intron Amino Acid Position:

1150

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.2

0.99

0.8

23.8

Major BPS

66.1

0.4

1.3

57.1

49.4

Major PPT

80.6

0.69

0.7

72.7

32.1

Minor 5ss

37.3

-1.4

46.9

48.4

Minor BPS

41.1

-0.6

2.5

63.98

45.9

Associated Gene:

Gene:

CACNA1E

Ensembl Gene ID:

ENSAPLG00000011451

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042365

10663634 - 10729946

66313

ENSAPLT00000012181

10663634 - 10729946

66313