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Intron Name: Anas_platyrhynchos_platyrhynchos_8_10687350_10687894_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10687350 - 10687894

Intron Length:

545

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGACTGCA

5'SS Class:

major

3'SS Sequence:

CCTCTCTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCAGCAC

U12 Branch Point Sequence:

TCGGCAGCACCC

Flanking Amino Acid:

PVLTNSDRNKVLRYFDYVFT

Intron Amino Acid Position:

1130

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

1.1

71.1

34.7

Major BPS

39.4

-0.6

1.3

39.4

40.4

Major PPT

77.7

0.62

0.7

72.4

25.7

Minor 5ss

33.1

-1.9

3.1

41.6

Minor BPS

34.2

-1.2

2.3

42.88

44.5

Associated Gene:

Gene:

CACNA1E

Ensembl Gene ID:

ENSAPLG00000011451

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042365

10663634 - 10729946

66313

ENSAPLT00000012181

10663634 - 10729946

66313