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Intron Name: Anas_platyrhynchos_platyrhynchos_8_1068769_1069439_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1068769 - 1069439

Intron Length:

671

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAC|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

CTTATATACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

GCTAATTTAATG

Flanking Amino Acid:

FDERKSDGVHTVETEDGDYM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

1.2

84.1

30.2

Major BPS

90.7

1.01

0.7

19.9

Major PPT

71.4

0.48

65.5

39.1

Minor 5ss

45.2

-0.5

2.8

57.4

40.7

Minor BPS

-0.1

1.6

53.54

41.7

Associated Gene:

Gene:

TMED5

Ensembl Gene ID:

ENSAPLG00000026535

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020292

1063669 - 1071360

7692