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Intron Name: Anas_platyrhynchos_platyrhynchos_8_10688025_10688405_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10688025 - 10688405

Intron Length:

381

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTGAGATTT

5'SS Class:

major

3'SS Sequence:

TGTTTCGGCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTGAG

U12 Branch Point Sequence:

TGTTTCGGCACA

Flanking Amino Acid:

SSMFIFSTTNPVRRACHYIV

Intron Amino Acid Position:

1086

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.9

0.33

1.3

68.9

38.5

Major BPS

46.9

-0.1

1.7

42.8

49.4

Major PPT

0.45

64.6

41.4

Minor 5ss

40.3

-1.1

3.3

60.9

43.8

Minor BPS

44.5

-0.4

2.4

64.34

42.1

Associated Gene:

Gene:

CACNA1E

Ensembl Gene ID:

ENSAPLG00000011451

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042365

10663634 - 10729946

66313

ENSAPLT00000012181

10663634 - 10729946

66313