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Intron Name: Anas_platyrhynchos_platyrhynchos_8_10689727_10690754_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10689727 - 10690754

Intron Length:

1028

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTACGTGGG

5'SS Class:

major

3'SS Sequence:

GTCCCCGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTGAC

U12 Branch Point Sequence:

TGGCACTGACCC

Flanking Amino Acid:

MSMWEPRSSHLRERRRRHHM

Intron Amino Acid Position:

772

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.3

0.29

1.2

51.5

45.4

Major BPS

61.3

0.28

52.7

34.2

Major PPT

69.1

0.43

0.9

61.5

34.9

Minor 5ss

33.9

-1.8

3.5

49.3

46.9

Minor BPS

45.1

-0.3

1.9

54.89

42.4

Associated Gene:

Gene:

CACNA1E

Ensembl Gene ID:

ENSAPLG00000011451

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012181

10663634 - 10729946

66313