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Intron Name: Anas_platyrhynchos_platyrhynchos_8_10693248_10694104_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10693248 - 10694104

Intron Length:

857

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGTCCC

5'SS Class:

strong_major

3'SS Sequence:

GTTTCCTCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAGCAA

U12 Branch Point Sequence:

GTTTCCTCCACA

Flanking Amino Acid:

NLANAQELTKDEQEEEEAFN

Intron Amino Acid Position:

721

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

69.9

40.9

Major BPS

48.5

-0

1.4

38.9

Major PPT

0.65

0.8

72.8

32.1

Minor 5ss

34.4

-1.8

45.5

42.5

Minor BPS

61.8

0.36

76.68

40.2

Associated Gene:

Gene:

CACNA1E

Ensembl Gene ID:

ENSAPLG00000011451

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042365

10663634 - 10729946

66313

ENSAPLT00000012181

10663634 - 10729946

66313