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Intron Name: Anas_platyrhynchos_platyrhynchos_8_10694173_10694483_R

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

10694173 - 10694483

Intron Length:

311

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTATCCGCC

5'SS Class:

weak_minor

3'SS Sequence:

TAGCTGCCCGCAG|A

3'SS Class:

minor_BPS

U2 Branch Point Sequence:

TCCTTAC

U12 Branch Point Sequence:

GCATCCTTAGCT

Flanking Amino Acid:

YFIVLTLFGNYTLLNVFLAI

Intron Amino Acid Position:

698

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

48.2

-0.1

1.2

38.3

Major BPS

68.9

0.47

59.6

38.6

Major PPT

65.6

0.35

0.9

58.4

Minor 5ss

57.6

0.26

2.8

77.7

37.2

Minor BPS

0.64

1.6

77.91

Associated Gene:

Gene:

CACNA1E

Ensembl Gene ID:

ENSAPLG00000011451

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012181

10663634 - 10729946

66313

ENSAPLT00000042365

10663634 - 10729946

66313