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Intron Name: Anas_platyrhynchos_platyrhynchos_8_10695030_10695287_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10695030 - 10695287

Intron Length:

258

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTCAC

5'SS Class:

strong_major

3'SS Sequence:

CTCGTGGTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCCTAC

U12 Branch Point Sequence:

TGCCCCCTACCC

Flanking Amino Acid:

ALLGMQLFGGRFNFIDGTPS

Intron Amino Acid Position:

634

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

72.3

39.5

Major BPS

43.7

-0.4

1.2

35.7

31.8

Major PPT

70.6

0.46

60.5

44.8

Minor 5ss

33.1

-1.9

3.2

43.3

44.4

Minor BPS

48.4

-0.1

61.67

43.3

Associated Gene:

Gene:

CACNA1E

Ensembl Gene ID:

ENSAPLG00000011451

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042365

10663634 - 10729946

66313

ENSAPLT00000012181

10663634 - 10729946

66313