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Intron Name: Anas_platyrhynchos_platyrhynchos_8_1069538_1071201_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1069538 - 1071201

Intron Length:

1664

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCGGGGGC

5'SS Class:

major

3'SS Sequence:

GTTTGTTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACAAAT

U12 Branch Point Sequence:

GTTTGTTTCACA

Flanking Amino Acid:

KDASLELEYQVLDGAGLDVD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.1

0.31

1.4

60.5

38.3

Major BPS

57.1

0.18

62.9

30.6

Major PPT

81.6

0.71

0.9

75.8

38.1

Minor 5ss

23.6

-3

3.4

32.5

42.5

Minor BPS

53.6

0.1

2.2

71.5

41.1

Associated Gene:

Gene:

TMED5

Ensembl Gene ID:

ENSAPLG00000026535

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020292

1063669 - 1071360

7692