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Intron Name: Anas_platyrhynchos_platyrhynchos_8_10695809_10696742_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10695809 - 10696742

Intron Length:

934

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTGAGTCCT

5'SS Class:

major

3'SS Sequence:

TTTTCTCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCCCAA

U12 Branch Point Sequence:

CGTGTCCCAAGG

Flanking Amino Acid:

NQPAWLTHFLYYAEFLFLGL

Intron Amino Acid Position:

515

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.8

0.47

1.1

64.8

40.9

Major BPS

48.1

-0.1

1.4

58.4

40.3

Major PPT

92.3

0.95

0.6

85.1

29.7

Minor 5ss

34.3

-1.8

3.1

52.6

43.7

Minor BPS

38.2

-1

2.1

40.16

43.8

Associated Gene:

Gene:

CACNA1E

Ensembl Gene ID:

ENSAPLG00000011451

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042365

10663634 - 10729946

66313

ENSAPLT00000012181

10663634 - 10729946

66313