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Intron Name: Anas_platyrhynchos_platyrhynchos_8_10696953_10697101_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10696953 - 10697101

Intron Length:

149

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TGG|GCGAGCGGA

5'SS Class:

major

3'SS Sequence:

TTTTCCCCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

GTCCTCTCACCT

Flanking Amino Acid:

DEHCVDIASVGNPLSRSGLK

Intron Amino Acid Position:

445

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.7

0.47

1.2

41.7

Major BPS

72.7

0.56

30.1

Major PPT

83.9

0.76

0.7

81.9

22.9

Minor 5ss

19.5

-3.5

3.8

19.9

37.9

Minor BPS

48.2

-0

1.8

65.97

44.5

Associated Gene:

Gene:

CACNA1E

Ensembl Gene ID:

ENSAPLG00000011451

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042365

10663634 - 10729946

66313

ENSAPLT00000012181

10663634 - 10729946

66313