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Intron Name: Anas_platyrhynchos_platyrhynchos_8_10697192_10697400_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10697192 - 10697400

Intron Length:

209

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGGA

5'SS Class:

strong_major

3'SS Sequence:

CTCCCCCTGCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGCCAC

U12 Branch Point Sequence:

AGCTCCAGCACC

Flanking Amino Acid:

NKNSGTSALEVLRRATIKRN

Intron Amino Acid Position:

415

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

75.2

35.1

Major BPS

43.9

-0.3

1.4

49.9

45.3

Major PPT

68.4

0.41

0.9

61.1

35.1

Minor 5ss

29.8

-2.3

3.3

38.8

46.3

Minor BPS

44.4

-0.4

2.1

55.62

42.1

Associated Gene:

Gene:

CACNA1E

Ensembl Gene ID:

ENSAPLG00000011451

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042365

10663634 - 10729946

66313

ENSAPLT00000012181

10663634 - 10729946

66313