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Intron Name: Anas_platyrhynchos_platyrhynchos_8_10715548_10715767_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10715548 - 10715767

Intron Length:

220

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

CCTGTGCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

CGTCCTTTGGCT

Flanking Amino Acid:

LHRACYTNNSGELEELDPPH

Intron Amino Acid Position:

263

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

74.7

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

72.9

0.52

0.9

65.3

36.2

Minor 5ss

26.2

-2.7

2.9

29.6

43.4

Minor BPS

43.1

-0.4

3.4

68.99

42.3

Associated Gene:

Gene:

CACNA1E

Ensembl Gene ID:

ENSAPLG00000011451

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042365

10663634 - 10729946

66313

ENSAPLT00000012181

10663634 - 10729946

66313