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Intron Name: Anas_platyrhynchos_platyrhynchos_8_10715921_10716538_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10715921 - 10716538

Intron Length:

618

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTCAG

5'SS Class:

major

3'SS Sequence:

TTTTCCCTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

GTGTGCTGAGCT

Flanking Amino Acid:

RPLKLVSGIPSLQIVLKSIM

Intron Amino Acid Position:

212

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

1.1

62.9

43.3

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

85.1

0.79

0.7

77.5

31.2

Minor 5ss

35.8

-1.6

2.9

46.9

42.4

Minor BPS

48.2

-0

2.1

69.77

46.6

Associated Gene:

Gene:

CACNA1E

Ensembl Gene ID:

ENSAPLG00000011451

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042365

10663634 - 10729946

66313

ENSAPLT00000012181

10663634 - 10729946

66313