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Intron Name: Anas_platyrhynchos_platyrhynchos_8_10716643_10723784_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10716643 - 10723784

Intron Length:

7142

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTCGG

5'SS Class:

major

3'SS Sequence:

TGTCTGCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTAAC

U12 Branch Point Sequence:

GGGGCCCTAACC

Flanking Amino Acid:

NVMDFIVVLSGILATAGTHF

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

59.7

46.7

Major BPS

59.7

0.24

1.1

61.2

32.6

Major PPT

72.4

0.5

0.9

65.8

Minor 5ss

27.7

-2.6

2.7

36.8

Minor BPS

52.1

0.04

1.8

60.8

43.9

Associated Gene:

Gene:

CACNA1E

Ensembl Gene ID:

ENSAPLG00000011451

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042365

10663634 - 10729946

66313

ENSAPLT00000012181

10663634 - 10729946

66313