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Intron Name: Anas_platyrhynchos_platyrhynchos_8_10747370_10747968_F

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

10747370 - 10747968

Intron Length:

599

Sequence Information:

Terminal Dinucleotides:

AT-AC

5'SS Sequence:

TTA|ATATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

ACTCGCTCCCTAC|G

3'SS Class:

minor_BPS

U2 Branch Point Sequence:

CTCTGAA

U12 Branch Point Sequence:

GACTCCTTGACT

Flanking Amino Acid:

WDLEDLDETISIVEANPRKF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

31.6

-1.1

3.3

48.7

42.6

Major BPS

69.8

0.49

37.5

Major PPT

37.8

-0.7

3.1

Minor 5ss

98.7

1.62

0.6

95.7

10.4

Minor BPS

76.3

0.91

1.2

81.14

40.4

Associated Gene:

Gene:

STX6

Ensembl Gene ID:

ENSAPLG00000020816

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027341

10745399 - 10757951

12553

ENSAPLT00000020894

10745399 - 10757951

12553