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Intron Name: Anas_platyrhynchos_platyrhynchos_8_10763548_10763982_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
10763548 - 10763982

Intron Length:
435

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GGG|GTAAGCCCG

5'SS Class:
major

3'SS Sequence:
TTTCTCCCCGCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
CTCTCAG

U12 Branch Point Sequence:
GCCCTCTCAGGC

Flanking Amino Acid:
MLGGHMEGGRRRE

Intron Amino Acid Position:
4

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.5
0.62
1.1
57.2
47.5

Major BPS
58.6
0.22
1.5
69
38.9

Major PPT
82.5
0.73
0.7
77.7
24.2

Minor 5ss
37.7
-1.4
3
40.9
44.9

Minor BPS
39.1
-0.8
1.8
40
39.5

Associated Gene:

Gene:
KIAA1614

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

10758393 - 10763992
5600