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Intron Name: Anas_platyrhynchos_platyrhynchos_8_1077242_1078814_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1077242 - 1078814

Intron Length:

1573

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACACAG

5'SS Class:

major

3'SS Sequence:

ACTTTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

CCCTTTTGAACA

Flanking Amino Acid:

KDLNTLEEQLRQLRKENHST

Intron Amino Acid Position:

257

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

1.2

62.5

43.8

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

0.81

0.7

85.1

Minor 5ss

36.9

-1.5

3.1

47.4

Minor BPS

54.4

0.14

1.5

58.67

41.9

Associated Gene:

Gene:

CCDC18

Ensembl Gene ID:

ENSAPLG00000002499

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002546

1072097 - 1096152

24056