Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_10788529_10793331_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10788529 - 10793331

Intron Length:

4803

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTATC

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTTGTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

TGTGCTATCATT

Flanking Amino Acid:

IALNVTVILSGVAFIEGPNV

Intron Amino Acid Position:

228

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

81.3

32.8

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

83.4

0.75

0.9

84.4

30.5

Minor 5ss

33.5

-1.9

3.1

44.4

43.7

Minor BPS

46.8

-0.1

2.1

68.98

42.6

Associated Gene:

Gene:

XPR1

Ensembl Gene ID:

ENSAPLG00000015869

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028904

10768204 - 10891942

123739

ENSAPLT00000016581

10767357 - 10891942

124586