Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_10793991_10795038_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10793991 - 10795038

Intron Length:

1048

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATATG

5'SS Class:

strong_major

3'SS Sequence:

TTTATCTCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

GTGTCTTTATCT

Flanking Amino Acid:

KINQLISETEEVVTNELEDG

Intron Amino Acid Position:

173

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

84.2

33.9

Major BPS

83.9

0.84

73.9

41.3

Major PPT

79.1

0.65

0.7

78.1

30.6

Minor 5ss

38.7

-1.3

2.9

50.6

45.9

Minor BPS

67.6

0.63

1.6

80.41

41.7

Associated Gene:

Gene:

XPR1

Ensembl Gene ID:

ENSAPLG00000015869

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028904

10768204 - 10891942

123739

ENSAPLT00000016581

10767357 - 10891942

124586