Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_10795189_10798588_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10795189 - 10798588

Intron Length:

3400

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCCACC

5'SS Class:

major

3'SS Sequence:

CCCTTCCCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTAAC

U12 Branch Point Sequence:

CAGCCAGTAACT

Flanking Amino Acid:

LSLILLQNYQNLNFTGFRKI

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.5

0.39

1.3

60.8

44.2

Major BPS

54.4

0.11

1.2

36.4

Major PPT

0.65

0.7

72.8

25.4

Minor 5ss

45.1

-0.5

2.9

42.4

Minor BPS

46.1

-0.2

2.2

63.8

45.9

Associated Gene:

Gene:

XPR1

Ensembl Gene ID:

ENSAPLG00000015869

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016581

10767357 - 10891942

124586

ENSAPLT00000028904

10768204 - 10891942

123739