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Intron Name: Anas_platyrhynchos_platyrhynchos_8_1086102_1086574_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1086102 - 1086574

Intron Length:

473

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATAATT

5'SS Class:

strong_major

3'SS Sequence:

ATGTATTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAAAAT

U12 Branch Point Sequence:

TTTACTGTAATG

Flanking Amino Acid:

ENQLKKKSEEVFYLQKEIKL

Intron Amino Acid Position:

712

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

86.5

28.6

Major BPS

62.8

0.32

1.1

67.9

34.4

Major PPT

80.8

0.69

0.9

77.6

40.7

Minor 5ss

39.5

-1.2

3.1

58.2

Minor BPS

55.2

0.02

2.1

67.54

40.8

Associated Gene:

Gene:

CCDC18

Ensembl Gene ID:

ENSAPLG00000002499

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002546

1072097 - 1096152

24056