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Intron Name: Anas_platyrhynchos_platyrhynchos_8_1087342_1087950_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1087342 - 1087950

Intron Length:

609

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTTTA

5'SS Class:

strong_major

3'SS Sequence:

ATCTTTTATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

CATCTTTTATTT

Flanking Amino Acid:

MKVDELNSIIRQIKLETDRY

Intron Amino Acid Position:

815

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

84.1

30.2

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

78.5

0.64

0.9

78.1

34.8

Minor 5ss

42.4

-0.8

3.1

57.6

47.1

Minor BPS

50.9

0.11

1.6

65.49

39.9

Associated Gene:

Gene:

CCDC18

Ensembl Gene ID:

ENSAPLG00000002499

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002546

1072097 - 1096152

24056