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Intron Name: Anas_platyrhynchos_platyrhynchos_8_1088115_1088893_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1088115 - 1088893

Intron Length:

779

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAATTTAG

5'SS Class:

major

3'SS Sequence:

AATGATTTAGAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTGTAAA

U12 Branch Point Sequence:

GTGTCTGTAAAA

Flanking Amino Acid:

QSVLNEKTNEDKLLQSETCH

Intron Amino Acid Position:

870

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

1.1

67.7

40.1

Major BPS

62.9

0.32

1.2

65.3

38.6

Major PPT

54.3

0.1

1.2

54.3

43.9

Minor 5ss

39.2

-1.2

2.8

45.3

Minor BPS

50.2

2.1

65.01

41.5

Associated Gene:

Gene:

CCDC18

Ensembl Gene ID:

ENSAPLG00000002499

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002546

1072097 - 1096152

24056