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Intron Name: Anas_platyrhynchos_platyrhynchos_8_1089093_1089675_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1089093 - 1089675

Intron Length:

583

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCTGC

5'SS Class:

strong_major

3'SS Sequence:

ATGTGAATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTGAA

U12 Branch Point Sequence:

TGTGCATTAAGC

Flanking Amino Acid:

VAVMNLTAELRYCKGEIEDK

Intron Amino Acid Position:

936

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

73.2

39.3

Major BPS

70.6

0.51

0.9

61.4

36.2

Major PPT

69.2

0.43

1.1

45.5

Minor 5ss

44.2

-0.6

2.9

59.3

45.5

Minor BPS

53.8

0.1

68.26

Associated Gene:

Gene:

CCDC18

Ensembl Gene ID:

ENSAPLG00000002499

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002546

1072097 - 1096152

24056