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Intron Name: Anas_platyrhynchos_platyrhynchos_8_1090986_1091407_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1090986 - 1091407

Intron Length:

422

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAATTCTT

5'SS Class:

major

3'SS Sequence:

ATTTTCTGTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATTAT

U12 Branch Point Sequence:

CTGTCCTGATAT

Flanking Amino Acid:

ELEVKECNKRIESLENKLQH

Intron Amino Acid Position:

1009

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

1.1

74.6

41.7

Major BPS

75.9

0.64

66.1

40.5

Major PPT

0.74

0.9

81.6

35.5

Minor 5ss

39.8

-1.1

3.1

51.1

45.2

Minor BPS

50.7

0.1

1.9

70.09

46.3

Associated Gene:

Gene:

CCDC18

Ensembl Gene ID:

ENSAPLG00000002499

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002546

1072097 - 1096152

24056