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Intron Name: Anas_platyrhynchos_platyrhynchos_8_1091540_1092872_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1091540 - 1092872

Intron Length:

1333

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAA|GCTCTTGAG

5'SS Class:

weak_major

3'SS Sequence:

TTACCTGTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAG

U12 Branch Point Sequence:

TGTTGTTTACCT

Flanking Amino Acid:

KIERKQQSLETVKNQGNCIG

Intron Amino Acid Position:

1053

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.1

1.4

45.4

Major BPS

72.4

0.56

1.5

71.4

45.1

Major PPT

78.4

0.64

0.9

72.1

37.7

Minor 5ss

18.8

-3.6

3.7

23.5

Minor BPS

58.2

0.34

80.14

42.2

Associated Gene:

Gene:

CCDC18

Ensembl Gene ID:

ENSAPLG00000002499

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002546

1072097 - 1096152

24056