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Intron Name: Anas_platyrhynchos_platyrhynchos_8_11020133_11020891_R


Intron Information:

Intron Rank:
25

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
11020133 - 11020891

Intron Length:
759

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TAG|GTAAATGGG

5'SS Class:
strong_major

3'SS Sequence:
ATTTCCACTTTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AACTCAA

U12 Branch Point Sequence:
GTTCACACAACT

Flanking Amino Acid:
KPKIKAPPLHRPETAKNWKS

Intron Amino Acid Position:
1800

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
83.8
0.8
0.9
69.5
41.5

Major BPS
69.1
0.48
0.9
69.6
26.6

Major PPT
75.1
0.57
0.8
72.2
33.1

Minor 5ss
31.4
-2.1
3.2
40.6
45.6

Minor BPS
48.5
-0
2
73.51
42.1

Associated Gene:

Gene:
CEP350

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

11007766 - 11053862
46097

11007766 - 11053862
46097