Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_11026792_11028148_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11026792 - 11028148

Intron Length:

1357

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATAGGA

5'SS Class:

major

3'SS Sequence:

TATTCTACCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTCTCATTATTC

Flanking Amino Acid:

ELGDQRTEPKETASEEESPV

Intron Amino Acid Position:

1582

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

37.3

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

77.3

0.61

0.8

74.8

34.3

Minor 5ss

29.9

-2.3

3.3

39.3

45.9

Minor BPS

58.2

0.24

1.9

71.26

40.4

Associated Gene:

Gene:

CEP350

Ensembl Gene ID:

ENSAPLG00000011152

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047406

11007766 - 11053862

46097

ENSAPLT00000011644

11007766 - 11053862

46097