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Intron Name: Anas_platyrhynchos_platyrhynchos_8_11037877_11038167_R


Intron Information:

Intron Rank:
14

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
11037877 - 11038167

Intron Length:
291

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTGAGAACA

5'SS Class:
strong_major

3'SS Sequence:
CTTGATCAAACAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCTTAAT

U12 Branch Point Sequence:
AATATCTTAATT

Flanking Amino Acid:
ESSRSKVHDRSSTSSRQESP

Intron Amino Acid Position:
1201

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
87.9
0.89
0.8
79.5
28.2

Major BPS
87
0.92
0.9
86.2
29.1

Major PPT
64.5
0.33
1
59
40.7

Minor 5ss
28.3
-2.5
2.7
32.3
41.9

Minor BPS
71.9
0.77
1.2
80.16
35.3

Associated Gene:

Gene:
CEP350

Ensembl Gene ID:

Chromosome:
8

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

11007766 - 11053862
46097

11007766 - 11053862
46097