Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_8_11038790_11039675_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11038790 - 11039675

Intron Length:

886

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGATCT

5'SS Class:

strong_major

3'SS Sequence:

TTACTCTACTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TGTTTTTTACTC

Flanking Amino Acid:

LLTTDAAHREMIELARTQIS

Intron Amino Acid Position:

1116

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

0.8

80.3

27.8

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

75.1

0.57

0.9

73.9

35.5

Minor 5ss

35.1

-1.7

3.1

48.3

47.4

Minor BPS

61.1

0.33

1.6

69.9

36.2

Associated Gene:

Gene:

CEP350

Ensembl Gene ID:

ENSAPLG00000011152

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047406

11007766 - 11053862

46097

ENSAPLT00000011644

11007766 - 11053862

46097